1. Kumar, A.,, J. Thomas, N. Gill, Y. Dwiningsih, C. Ruiz, A. Famoso, A. Pereira (2023). Molecular mapping and characterization of QTLs for grain quality traits in a RIL population of US rice rice under high nighttime temperature stress. Scientific Reports. 13 (1):4880. https://doi.org/10.1038/s41598-023-31399-w

2. Kumar, A., C. Gupta, J. Thomas, A. Pereira (2021). Genetic dissection of grain yield component traits under high nighttime temperature stress in a rice diversity panel. Front. Plant Sci. 12:712167. doi:10.3389/fpls.2021.712167

3. Dwiningsih, Y., A. Kumar, J. Thomas, C. Ruiz, J. Alkhatani, A. Al-hashami, A. Pereira (2021). Identification of genomic regions controlling chalkiness and grain characteristics in a recombinant inbred line rice population based on high-throughput SNPs markers. Genes, 12(11),1690. https://doi.org/10.3390/genes12111690

4. Dwiningsih, Y., A. Kumar, J. Thomas, C. Ruiz, J. Alkahtani, N. Baisakh, A. Pereira (2021). Quantitative trait loci and candidate gene identification for chlorophyll content in RIL rice population under drought conditions. Indonesian Journal of Natural Pigments, 3(2), 54. doi.org/10.33479/ijnp.2021.03.2.54

5. Kumar, A., S. Basu, R. Venkategowda, A. Pereira (2017). Mechanisms of drought tolerance in rice. In Takuji Saaski Editor-in-Chief (edi.), Achieving sustainable cultivation of rice Volume 1 Breeding for higher yield and quality (pp. 6-10). Burleigh Dodds Science Publishing Limited 82 High Street Sawston, Cambridge CB22 3HJ UK.

6. Basu, S., V. Ramegowda, A. Kumar, and A. Pereira (2016). Plant adaptation to drought stress. F1000Research, 5 (F1000): 1554. (doi: 10.12688/f1000research.7678.1)

7. Singh, D., A. Sirohi, P. Sirohi, P. Sirohi, S. Chand, R. Kumar, S.K. Mishra, N. Kumar, A. Kumar, R. Kumar, A. Singh, L.K. Gangwar, and S. Gupta (2015). Application of molecular makers to find out classificatory determinants of rice (Oryza sativa L.) African Journal of Biotechnology 10(62): 13390-13398.

8. Kumar, N., D. Singh, S. Gupta, A. Sirohi, B. Ramesh, P. Sirohi, P. Sirohi, A. Singh, N. Kumar, A. Kumar, R. Kumar, R. Kumar, J. Singh, P. Kumar, P. Chauhan, S. Chand (2013). Determination and expression of genes for resistance to blast disease (Magnaporthe oryza) in Basmati and non-basmati rice African Journal of Biotechnology 12(26): 4098-4104.

9. Singh, D., A. Kumar, N. Kumar, V. Kumar, S. Kumar, A. Bhardwaj, P. Sirohi and S. Chand (2011). Comparison of traditional physico-chemical methods and molecular marker assays for characterization of Basmati rice (Oryza sativa L.). African Journal of Biotechnology 10(62): 13390-13398.

10. Chand, S., A. Kumar, V. Kumar, R. Kumar, and D. Singh (2011). Phylogenic analysis of Indica rice (Oryza sativa L.) through molecular markers. Vegetos 24(2):21-24.

11. Singh, D., A. Kumar, A. Sirohi, P. Kumr, J. Singh, V. Kumar, A. Jindal, S. Kumar, N. Kumar, V. Kumar, V. Sharma, S. Gupta, and S. Chand (2011). Improvement of Basmati rice (Oryza sativa L.) using traditional breeding technology supplemented with molecular markers. African Journal of Biotechnology 10(4): 499-506.

12. Mahajan, N., D. Singh, A. Kumar, N. Mahajan, V. Kumar, A. Singh, N. Kumar, and B. Ramesh (2011). Molecular marker essays for estimating genetic diversity in aerobic rice (Oryza sativa L.): A comparative assessment. Vegetos 24(1):147-151.

13. Mehla, K., S. Chaudhary, A. Kumar, V. Kumar, P. Chauhan, S. Gupta, J. Singh, P. Kumar, V. Kumar, N. Kumar, A. Jindal, S. Kumar, V. Sharma, S. Chand, N. Mahajan, A. Singh, B. Ramesh and D. Singh (2011). Advances in DNA sequencing: Challenges and limitations of personal sequencing. African Journal of Agricultural Research 6(6):1277-1280.

14. Singh, D., A. Kumar, and S. Kumar (2011). Functional mechanism of RNA interference technology: A review. Vegetos 24(1):136-141.

15. Singh, D.,  A. Kumar, P. Chauhan, V. Kumar, N. Kumar, A. Singh, N. Mahajan, P. Sirohi, S. Chand, B. Ramesh, J. Singh, P. Kumar, R. Kumar, R.B. Yadav, and R. K. Naresh (2011). Marker assisted selection and crop management for salt tolerance: A review. African Journal of Biotechnology 10(66): 14694-14698.

16. Kumar, A., S. Kumar, R. Kumar, V. Kumar, L. Prasad, N. Kumar, and D. Singh (2010). Identification of blast resistance expression in rice genotypes using molecular markers (RAPD & SCAR). African Journal of Biotechnology 9(24):3501-3509.

17. Kumar, N., D. Singh, A. Kumar, V. Kumar, L. Prasad, V. Malik, and S.K. Bhatnagar (2010). Evaluation of rice genotypes for resistance to blast (Magnaporthe oryzae). Vegetos 23(01):160-166.

18. Singh, D., A. Kumar, A. Sirohi, and H.S. Dhaliwal (2010). Introgression of genes for dwarfism (sd1) and bacterial leaf blight resistance (Xa21 and xa13) into basmati rice using phenotype and marker-assisted selection. Progressive Agriculture 10 (3): 166-168.

19. Singh, D., A. Kumar, A. Sirohi, and H.S. Dhaliwal (2010). Introgression of genes for dwarfism (sd1) and bacterial leaf blight resistance (Xa21 and xa13) into basmati rice using phenotype and marker-assisted selection. Prog. Agri., 10 (3): 166-168.

20. Chitragupt, D. Singh, A. Kumar, A. Sirohi, and V. Kumar (2010). DNA based analysis of molecular diversity of aerobic rice (Oryza sativa L.) using molecular markers. Prog. Agri., 10 (3): 187-191.

21. Sharma, V., D. Singh, A. Kumar, A. Sirohi, and V. Kumar (2010). Assessment of molecular diversity in Indica rice (Oryza sativa L.). Prog. Agri., 10 (3): 192-196.

22. Singh, D., A. Kumar, A. Sirohi, D.R. Rajpurohit, H.S. Dhaliwal, V. Kumar, and S. Chand (2009). Inter-SSRs and SSRs based molecular profiling of Basmati and non-Basmati Indica rice.  Prog. Agri., 9(2): 192-202.

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1. Kumar, A., Y. Dwiningsih, C. Cruiz, J. Thomas, N. Gill, P. Counce, T. J. Sibbenmorgen, K.A.K. Moldenhauer, and A. Pereira (2022). Association mapping unravels novel potential candidate genomic loci  associated with number of spikelets and spikelet sterility in rice japonica panel under high nighttime temperature. In  J. Hardke, X. Sha  and N. Bateman. (eds.), B. R. Wells Arkansas Rice Research Studies 2021 under Breeding, Genetics, and Physiology category. Arkansas Agricultural Research Series 685. Division of Agriculture, University of Arkansas pp 55-61.

2. Kumar, A., Y. Dwiningsih, C. Cruiz, J. Thomas, P. Counce, T. J. Sibbenmorgen, K.A.K. Moldenhauer, and A. Pereira (2021). Genome-wide association study to identify potential candidate genomic loci associated with grain yield in Japonica rice under high nighttime temperature. In R. J. Norman R. J.  and Moldenhauer K.A.K. (eds.), B. R. Wells Arkansas Rice Research Studies 2020 under Breeding, Genetics, and Physiology category. Arkansas Agricultural Research Series 676. Division of Agriculture, University of Arkansas pp 47-51.

3. Kumar, A., S. Yingling, Y. Dwiningsih, C. Cruiz, C. Gupta, J. Thomas, P. Counce, T. J. Sibbenmorgen, K.A.K. Moldenhauer, and A. Pereira (2020). Genome-wide association study for identification of novel genomic loci associated with grain yield and quality traits in Japonica rice under high nighttime temperature. In R. J. Norman R. J.  and Moldenhauer K.A.K. (eds.), B. R. Wells Arkansas Rice Research Studies 2019 under Breeding, Genetics, and Physiology category. Arkansas Agricultural Research Series 667. Division of Agriculture, University of Arkansas pp. 45-48.

4. Kumar, A., S. Yingling, C. Cruiz, Y. Dwiningsih, C. Gupta, J. Thomas, P. Counce, T. J. Sibbenmorgen, K.A.K. Moldenhauer, and A. Pereira (2019). Screening of Inidca and Japonica subspecies for grain yield and quality under high nighttime temperature. In R. J. Norman R. J.  and Moldenhauer K.A.K. (eds.), B. R. Wells Arkansas Rice Research Studies 2018 under Breeding, Genetics, and Physiology category. Arkansas Agricultural Research Series 659. Division of Agriculture, University of Arkansas pp. 61-66.

5. Kumar, A., S. Yingling, J. Thomas, C. Cruiz, Y. Dwiningsih, C. Gupta, P. Counce, T.J. Sibbenmorgen, K.A.K. Moldenhauer, A. Pereira (2018). Screening of diverse Japonica rice genotypes for grain yield and quality under high nighttime temperature. In R. J. Norman N.J.  and Moldenhauer K.A.K. (eds.), B. R. Wells Arkansas Rice Research Studies 2017 under Breeding, Genetics, and Physiology category. Arkansas Agricultural Research Series 651. Division of Agriculture, University of Arkansas pp. 50-56.

6. Kumar, A., J. Thomas, S. Yingling, Y. Dwiningsih, V. Ramegowda, J. Gaspar, C. Henry, P. Counce, T.J. Siebenmorgen, K.A.K. Moldenhauer, and A. Pereira (2017). Screening of diverse rice cultivars for heat tolerance and grain quality under high nighttime temperature. In Norman N. J. and Moldenhauer K.A.K. (eds.), B. R. Wells Arkansas Rice Research Studies 2016 under Breeding, Genetics, and Physiology category. Arkansas Agricultural Research Series 643. Division of Agriculture, University of Arkansas pp. 61-67.

Peer-Reviewed Conferences/Seminars Proceedings:

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1. Singh, D., A. Kumar, A. Sirohi, A. Kumar, P. Kumar, J. Singh, and Sachin (2010). Crop management in salt affected soils: molecular interventions and limitations: A visionary view. In the proceeding of Zonal seminar on Physiological and Molecular Interventions for Yield and Quality Improvement in Prop plants, SVP University of Ag & Tech., Meerut, India pp. 32-37.

2. Singh, D., A. Kumar, A. Sirohi, R. Kumar, R. Yadav K. Mehla, and V. Kumar (2009). Effect of adaptation to irrigated and aerobic agro-eco systems and quality on ISSR and SSR based genetic analysis of basmati and non-basmati rice of Asia: Limitations of molecular tools. In the proceeding of International Conference on Current trends in Biotechnology & Implication in Agriculture, SVP University of Ag & Tech., Meerut, India pp. 38-49.

3. Singh, D., A. Sirohi, A. Kumar, and V. Kumar (2008). Molecular profiling of traditional and evolved varieties of basmati and non-basmati Indica rice of Asia by using Inter SSR–PCR and SSR- PCR assays. In the proceeding of National Symposium on Biotechnology: Vision 2020, SVP University of Ag & Tech., Meerut, India pp.06-14.

4. Singh,D., A. Sirohi, D. R. Purohit, H.S. Dhaliwal, A. Kumar, S. Kumar, S. Chand, G. Singh, J. Pareek. and A. Singh (2008). Application of phenotypic and marker assisted selection for introgression of dwarfness and bacterial leaf blight resistance genes in basmati rice. In the proceeding of National Symposium on "Advances in biotechnology Research for Crop Improvement and Food Security, SVP University of Ag & Tech., Meerut, India pp. 57-62.

5. A. Sirohi, D. Singh, A. Kumar, S. Gupta, V Kumar, A. Singh, S. Chand, and R. K. Naresh (2008). Role of biotechnology in eradication of poverty and hunger: a visionary view. In the proceeding of National Symposium on Biotechnology: Vision 2020, SVP University of Ag & Tech., Meerut, India pp. 62-64.

6.  N.K. Tyagi, A.K. Singh, B. Ramesh, A. Kumar, Vinay Kumar, Anupam Dixit and D. Singh (2008). The role of marker assisted breeding in rice improvement. In the proceeding 

7. of National Symposium on Biotechnology: Vision 2020, SVP University of Ag & Tech., Meerut, India pp. 62-64.

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